Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015938485.1_cds_XP_016483334.1_74456
CDS Infomation

[gene=LOC107804036] [db_xref=GeneID:107804036] [protein=glycine-rich domain-containing protein 2] [protein_id=XP_016483334.1] [location=complement(join(1556..2092,2176..2336,2560..2684,2780..3300,5142..5405,6062..6451,6754..6868,6978..7153))] [gbkey=CDS]
Sequence

ATGTCAACTTCAGATGGTGCTTTTATGAGGAGCCTAAGTGAGATATCTGAGGAAGAAACT
GTGCGTTTGAGTGTTGATCTTGTTGCCGCTTCCAGGCGAAATCTTGGATTCTTGAGACTT
GTATCTGAGTCTCATTGGCTTCACGAGAAACCCACCATTCTTGAATCTATTAGAAGGTAT
GATCAGTTATGGATGCCATTGATTTCTGATCTTTATAATGGGTCAACCCCTCCAATGATT
CTCCCTCCTCTTGATATTGAATGGGTTTGGTACTGTCACACCTTAAATCCGGTCAGTTAC
AGGCAATATTGTGAATCAAGGTTCTGTAAACTCATTGGAAAAGCAACTATATTTAATGAA
GAAAATGAAGAGTATGCATTAAATAGATGCAAAGAAATTTGGGTTCAAAGATACCCAACT
GAGCCTTTTGAAAATGAATCTGACTCCAATTTACAGCACCCTGTCTCCATTCTTCACGAA
GATCTGCATCTGCTAAATGAAGTATCCAAACAAAGACATTTATACACCAAATTTTCTGAG
CCTTATTATTCAGAGATTGTTTATCTGATAGCAGCTCGACAACGGTATAAGGGCTTTCTG
TATATGATGCATAGATTTGCAGATACTTGCTCTATTTTAGTCCCTACTTCAGATATTCTT
CTTATGTGGCTAACTCATCAAAGTTATCCTATTGCGTACGCATTGGACACAAAGGGGTTG
GAGGAGGAAATGAGAAAAGTAGTAGGACCATGGGAGGTTGTGAAGGAAGAAGGAATTGAG
GATACAAAGAAACTATGGGAAAGAATATATGATCAGCCATATGAGAAAGCTGGTGGTTTG
GCCATTGGAAAGGCTGTTGAGATCAAGCCGCCTATTCACTGGGAGGTCACAGATACTGAC
GTTAATGCAAAATACTCATCCATGTTACCACGGTTCTTGCTTGAGGTTTGCTTAACAGTG
AAGCTAAAATCAAAGATGAAACCTTTGAGCTGCGATGCATCAAAGGAGTTCCTACGTCTT
CAGATGGTCAGATGTCACAGGGAGCTCAAAACAGATAAACCACTCTGCAACTTCACGTCT
CAAAGGTGGCGAAAAGCTTTGCATCTTTATTGTGAGTTTGGAACGAAAGGATTGGTTCTT
GAGGTTCGCCAACGTGGTGGTCGCTGCATTAAAGGAAGTAGCCTGAGAGAGAGTGTAACA
TTTCTTTGGAATGATTTATTACGTGCGCCTTCTCTCACTTTGTCAAAAGAAATTGACCAA
ACAGTCAGGGTAGCTACCTCAATAACTCCTCCTGCCCAAGCATCCTACTTGTTGAAATGT
GTACCCGATCGCGTTTCAGATGATTCAGGTGCCATGATATCTGATGTTATTCTGAAAATG
AATCAGTATCGTCCCCAAGAAGGTCGATGGTTATCTCGCACTGTTCTGGATCATGCAGGC
AGGGAATGCTTTGTGATTCGATTTAGAGTTGGAAGCGGCTTTTGGAGGAGAGGACCTGAA
ACTCCTTCAGCTGTAAAATGGGAGGACCGCATTATAGAAATACGTGAAGGTCATTGGTCC
TATGTTGCTGGTTCCATAGGTAGAGCACCTGAGAAAGTGGTAGGTTCTGCAAAACCAAAA
GATCCACCAGAAGGATGGCATTCTCTGTGGAACCTTTCAACTGGAGATGAGCTACTAGTA
CGTTCGGAATCATCAACATCCAGTTCAGGCTTAAGTTTCAGCCTCATAAACCAGCAATCA
ACTGATTCAGCGGTAAAGTTATTGGAAGGGCGGCAAATGCAGTATGAAGTCAATAACTCT
GGCTCGGCTGAAGAGACAGAAAATGCGCCAAAAGAAAAGTTAAAGCAAGTTGAAGACAAA
GAAGACGGCGGATTCATAACGGTAGTTAGGTTCTCGGAGAATGACCCCGTTGGAAAAGCT
ACAGCACTGCTTAACTGGAAATTATTGGTGGTGGAGTTTTTACCTGAAGAAGATGCTGTA
TTCGTACTTCTTCTTTGCATGTCAATCGTCAGAAGCATATCGGAAATGAAGAAGCAAGAT
GTAGGAAGCCTGTTGGTTAGAAGAAGAATAAAAGAAGCAAAACTCGGTGAGAGAGATTGG
GGCTCAGTGATTCTCCACGCTTCTTCATATTCTCCGTCGATCTGTTCACCTTACCTTCAG
ACTTGGTATTGGAACGCAAAAGCAGTAATGGGATCACAAGATAATATCCCAAGGCTACCA
GCTCCAGCATTGACTTATACACAGGCTGAAGGTGGAGACAGGTTGTACAAACAGGGCATA
ATCGATTAG

Peptide Sequence

PEP ID

XP_016483334.1
PEP Infomation

PREDICTED: glycine-rich domain-containing protein 2 [Nicotiana tabacum]
Sequence

MSTSDGAFMRSLSEISEEETVRLSVDLVAASRRNLGFLRLVSESHWLHEKPTILESIRRY
DQLWMPLISDLYNGSTPPMILPPLDIEWVWYCHTLNPVSYRQYCESRFCKLIGKATIFNE
ENEEYALNRCKEIWVQRYPTEPFENESDSNLQHPVSILHEDLHLLNEVSKQRHLYTKFSE
PYYSEIVYLIAARQRYKGFLYMMHRFADTCSILVPTSDILLMWLTHQSYPIAYALDTKGL
EEEMRKVVGPWEVVKEEGIEDTKKLWERIYDQPYEKAGGLAIGKAVEIKPPIHWEVTDTD
VNAKYSSMLPRFLLEVCLTVKLKSKMKPLSCDASKEFLRLQMVRCHRELKTDKPLCNFTS
QRWRKALHLYCEFGTKGLVLEVRQRGGRCIKGSSLRESVTFLWNDLLRAPSLTLSKEIDQ
TVRVATSITPPAQASYLLKCVPDRVSDDSGAMISDVILKMNQYRPQEGRWLSRTVLDHAG
RECFVIRFRVGSGFWRRGPETPSAVKWEDRIIEIREGHWSYVAGSIGRAPEKVVGSAKPK
DPPEGWHSLWNLSTGDELLVRSESSTSSSGLSFSLINQQSTDSAVKLLEGRQMQYEVNNS
GSAEETENAPKEKLKQVEDKEDGGFITVVRFSENDPVGKATALLNWKLLVVEFLPEEDAV
FVLLLCMSIVRSISEMKKQDVGSLLVRRRIKEAKLGERDWGSVILHASSYSPSICSPYLQ
TWYWNAKAVMGSQDNIPRLPAPALTYTQAEGGDRLYKQGIID

Transcript Sequence

Gene sequence data has not been registered.